Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930380.1_cds_XP_016477407.1_69144
CDS Infomation

[gene=LOC107798887] [db_xref=GeneID:107798887] [protein=abscisic acid 8'-hydroxylase 1-like] [protein_id=XP_016477407.1] [location=join(98201..98439,99926..100250,100512..100661,100857..101108,101200..101286,101393..101471,101646..101752,101859..101977,102077..102179)] [gbkey=CDS]
Sequence

ATGCTTACTTTGTCAATGGAATACATTCTCCTCCTAGTAAGAAACTACTATGACATTCTT
CTGGCTTCAATACTTTTCATAAGTATTACACTTTACAAAGTATCAGGAAGAACTAAAGAT
GCAAAAAGCTGCATACCAGGGAGCTTGGGAATACCTTTTGTGGGAGAGACCTTTGCACTT
CTATCAGCAACCAACAGTGTCAAGGGTTGTTATGACTTTGTTAGACTCCGACGTGAGTGG
CATGGAAAATGGTTTAAAACGAGGATTTTCGGGAAGATACATGTGTTTGTTCCAAGTGTT
GAGGGTGCAAAAACAATTTTTACCAATGATTTTACTCTTTTCAACAAGGGCTACGTGAAA
TCAATGGCGGATGCTGTGGGAAAGAAAAGCTTGTTATGTGTTCCTCAAGAAAGTCACAAA
AGGATTAGACGTCTCCTTTCTGATCCTTTCTCTATGAATTCACTGTCTAAGTTTGTCCAG
AGGTTTGATAACATGCTATCTGAAAGATTAAAGAAAGTACAAAAGGAAGGGAAGAGATTC
ACTGTGCTTGACTTCAACATGAAGATAACATTTGATGCAATGTGCGATATGCTGATGAGC
ATAAAAGATGCTTTGTTGCTAGAACAAATTGAAAGAGACTGCACTGCTGTTTCTGATGCT
ATGCTATCCTTTCCCGTCATGATTCCAACCACCAGATATTATAAAGGCATCAAGGCACGC
ACAAGGTTAATGGAGACCTTCAAGGCAATGATAACAAGTCGGCGCAATGGGAAGGAATAT
CATGAAGACTTCCTGCAGTCAATGTTGGAGAAGGATTCCTGTCCAGTCAATCAAAAGCTT
GATGATGAAGAGATCATGGATAATTTGTTAACACTGATAATTGCAGGGCAGACGACTACT
GCAGCTGCAATGATGTGGAGTGTCAAGTTTTTGCATGAGCACGGAGAAGTCCAGGACAGG
CTCAGAGAAGAACAAATTTCAATACTCAAAAGCAAGCCTAATGGAGCCTTACTTACCCTG
GATGATCTCAATAGCATGTCCTATGCCTCAAAGGTTGTCAAAGAGACACTGAGGATGTCA
AATGTCCTGCTATGGTTCCCTCGAGTTGCACTTGATGACTGCAATATTGAAGGTTTTGAA
ATAAAGAAAGGGTGGCATGCCAACATAGATGCGTCATGCATACACTATGATCCAGCATTG
TACAAGGACCCTATGCAGTTCAACCCTTCAAGATTTGACGAAATGCAAAAGCCATACAGC
TACATTCCTTTTGGATCAGGACCACGAACTTGCTTGGGAATTAACATGGCAAAAATGACC
ATGTTGGTATTTTTGCACAGACTGACAAGTGGATACAAGTGGAAAGTTGACGATCTAGAT
CCCAGCCTCGAAAGAAAAGCACATATCCCCAGATTGAGAAGTGGGTGTCCAATAACTTTG
ACAGTCTTGCAAGATGAATAG

Peptide Sequence

PEP ID

XP_016477407.1
PEP Infomation

PREDICTED: abscisic acid 8'-hydroxylase 1-like [Nicotiana tabacum]
Sequence

MLTLSMEYILLLVRNYYDILLASILFISITLYKVSGRTKDAKSCIPGSLGIPFVGETFAL
LSATNSVKGCYDFVRLRREWHGKWFKTRIFGKIHVFVPSVEGAKTIFTNDFTLFNKGYVK
SMADAVGKKSLLCVPQESHKRIRRLLSDPFSMNSLSKFVQRFDNMLSERLKKVQKEGKRF
TVLDFNMKITFDAMCDMLMSIKDALLLEQIERDCTAVSDAMLSFPVMIPTTRYYKGIKAR
TRLMETFKAMITSRRNGKEYHEDFLQSMLEKDSCPVNQKLDDEEIMDNLLTLIIAGQTTT
AAAMMWSVKFLHEHGEVQDRLREEQISILKSKPNGALLTLDDLNSMSYASKVVKETLRMS
NVLLWFPRVALDDCNIEGFEIKKGWHANIDASCIHYDPALYKDPMQFNPSRFDEMQKPYS
YIPFGSGPRTCLGINMAKMTMLVFLHRLTSGYKWKVDDLDPSLERKAHIPRLRSGCPITL
TVLQDE

Transcript Sequence

Gene sequence data has not been registered.